Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014748.1 Corchorus capsularis cultivar CVL-1 contig14769, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12111

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1143--1170
2
14.0
2
100
0
56
50
0
0
50
1.00
3443--3486
2
22.0
2
95
0
79
47
0
2
50
1.13
4951--5026
33
2.4
32
85
14
97
9
23
42
25
1.83
8346--8406
20
3.3
20
62
29
53
57
14
14
13
1.66
8347--8419
35
2.1
35
100
0
146
56
13
16
13
1.68
11584--11612
13
2.2
13
100
0
58
48
0
6
44
1.29

Tables:   1

The End!