Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014751.1 Corchorus capsularis cultivar CVL-1 contig14772, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21888

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
496--562
27
2.5
27
82
4
82
41
23
17
16
1.89
6263--6408
40
3.7
40
88
1
215
42
8
17
31
1.79
7858--7919
29
2.1
29
96
0
115
19
29
9
41
1.83
8000--8046
24
2.0
24
91
0
76
25
17
10
46
1.79
9118--9168
14
3.7
14
75
12
52
45
5
9
39
1.62
9795--9844
24
2.1
24
89
10
77
78
0
22
0
0.76
9799--9845
12
3.9
13
78
15
57
78
0
21
0
0.75
11159--11214
4
14.0
4
76
0
58
42
21
7
28
1.79
11156--11214
12
4.9
12
91
0
100
42
20
8
28
1.81
11156--11214
24
2.5
24
100
0
118
42
20
8
28
1.81
12228--12380
61
2.5
60
81
9
193
35
13
23
27
1.93
12301--12653
85
4.2
85
87
2
433
37
13
22
26
1.91
12607--13108
59
8.4
58
83
5
481
34
13
25
26
1.93
12620--13108
58
8.2
60
85
5
514
34
13
25
26
1.93
13065--13144
36
2.2
36
88
4
117
38
13
21
26
1.90
13527--13582
28
2.0
28
100
0
112
28
10
7
53
1.62
15840--15923
31
2.8
31
83
3
109
26
22
17
33
1.96
17588--17672
31
2.8
30
78
5
100
35
16
22
25
1.95
19425--19473
21
2.3
21
85
0
62
10
32
28
28
1.90

Tables:   1

The End!