Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014756.1 Corchorus capsularis cultivar CVL-1 contig14777, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45140

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1316--1430
44
2.7
43
88
9
157
45
6
14
33
1.70
1373--1434
20
3.1
20
68
9
54
50
1
16
32
1.55
2464--2499
19
1.9
18
88
5
54
41
2
22
33
1.68
3824--3872
21
2.3
21
82
0
62
18
8
8
65
1.44
5786--5826
12
3.4
12
86
0
55
9
9
2
78
1.06
5792--5825
6
5.7
6
85
0
50
2
11
2
82
0.89
6317--6357
21
2.0
21
85
9
57
21
12
21
43
1.85
7929--7964
19
1.9
18
88
5
54
41
2
22
33
1.68
14329--14388
30
2.0
30
86
0
84
36
18
25
20
1.94
15257--15341
16
5.2
17
71
13
72
14
8
38
38
1.76
15255--15361
32
3.3
32
88
2
144
14
10
37
37
1.81
15503--15541
20
2.0
20
85
10
53
35
5
5
53
1.45
15549--15609
22
3.0
21
68
26
60
3
9
37
49
1.52
15561--15606
16
2.9
16
90
0
74
2
10
36
50
1.50
20885--21021
67
2.0
67
95
0
247
54
5
22
16
1.63
29599--29640
21
2.0
22
90
4
68
9
26
28
35
1.88
35385--35449
30
2.2
30
88
5
96
23
38
27
10
1.88
42404--42433
14
2.1
14
93
0
51
43
6
20
30
1.77

Tables:   1

The End!