Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014761.1 Corchorus capsularis cultivar CVL-1 contig14782, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17200

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4471--4514
15
2.9
15
80
16
54
47
2
40
9
1.48
7187--7233
25
2.0
23
91
8
76
34
25
2
38
1.68
8202--8325
3
41.3
3
76
3
61
7
62
1
29
1.32
8223--8335
24
5.0
24
74
12
94
8
62
0
27
1.30
8200--8298
42
2.4
42
96
0
180
6
61
2
30
1.31
8999--9023
13
1.9
13
100
0
50
0
36
0
64
0.94
10834--10876
22
2.0
21
86
13
61
58
0
0
41
0.98
14920--14969
20
2.5
20
80
6
57
50
14
2
34
1.54

Tables:   1

The End!