Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014762.1 Corchorus capsularis cultivar CVL-1 contig14783, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28689

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12915--12952
14
2.7
14
80
12
51
68
0
28
2
1.03
13475--13532
28
2.1
28
96
0
107
39
17
10
32
1.83
13507--13584
36
2.2
36
90
0
120
41
19
6
33
1.77
21756--21781
2
13.0
2
100
0
52
50
0
0
50
1.00
23395--23428
1
34.0
1
93
0
59
0
2
0
97
0.19
28328--28384
3
19.3
3
85
10
82
63
0
1
35
1.05
28660--28687
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!