Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014763.1 Corchorus capsularis cultivar CVL-1 contig14784, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19411

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4607--4670
29
2.1
31
91
5
105
28
18
4
48
1.68
4798--4887
38
2.4
37
81
7
119
15
21
8
54
1.68
5026--5063
19
2.0
20
85
15
53
28
5
2
63
1.30
5229--5390
22
7.3
22
76
8
121
32
9
18
38
1.84
5455--5545
22
4.1
22
76
10
78
34
7
19
38
1.81
5571--5842
66
4.2
65
73
13
211
43
9
13
33
1.77
5571--5844
22
12.5
22
73
10
138
43
9
13
33
1.77
5962--6104
44
3.3
42
78
13
112
41
10
13
34
1.79
6131--6188
23
2.5
23
91
0
89
37
5
13
43
1.67
6283--6389
45
2.4
44
80
7
110
31
13
17
37
1.88
5986--6478
22
22.6
22
68
11
133
38
10
15
35
1.81
6599--6624
2
13.0
2
100
0
52
50
0
0
50
1.00
9210--9239
2
15.0
2
92
0
51
53
0
0
46
1.00
14484--14724
40
5.7
40
77
13
214
12
24
21
40
1.89
15935--15981
24
1.9
25
86
4
69
31
21
14
31
1.94
17958--18113
85
1.9
82
85
4
213
53
7
22
16
1.68

Tables:   1

The End!