Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014766.1 Corchorus capsularis cultivar CVL-1 contig14787, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2336

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--116
26
3.8
26
78
9
110
55
6
20
18
1.64
1--118
53
2.3
52
86
2
166
55
6
21
16
1.63
204--243
21
1.9
21
89
0
62
55
0
22
22
1.44
197--250
15
3.8
13
80
11
54
57
0
22
20
1.41
227--362
35
3.9
34
87
2
173
53
3
23
19
1.60
227--379
69
2.3
64
83
7
173
53
3
24
18
1.59
373--456
40
2.1
40
84
8
109
57
4
21
16
1.58
499--576
7
11.0
7
68
13
52
60
3
16
19
1.51
395--683
22
13.7
22
74
10
221
55
3
20
20
1.58
629--683
7
7.7
7
77
4
56
63
1
18
16
1.39
628--710
36
2.3
36
85
4
114
61
1
18
19
1.41
629--683
14
3.9
14
76
4
65
63
1
18
16
1.39

Tables:   1

The End!