Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014775.1 Corchorus capsularis cultivar CVL-1 contig14796, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17121

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112--213
31
3.3
31
84
0
123
18
22
26
32
1.97
8114--8213
27
3.6
27
73
15
103
34
13
0
53
1.40
8373--8417
12
3.5
13
82
11
58
62
2
4
31
1.27
8368--8433
24
2.7
24
80
15
73
59
3
7
30
1.41
8958--8988
15
2.1
15
100
0
62
0
12
22
64
1.27
14516--14580
31
2.1
31
91
5
105
41
20
16
21
1.90
15838--15881
22
1.9
23
90
9
72
13
15
13
56
1.67
16732--16759
10
2.8
10
100
0
56
32
10
7
50
1.64

Tables:   1

The End!