Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014778.1 Corchorus capsularis cultivar CVL-1 contig14799, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9453

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6641--6692
18
3.1
16
78
13
52
28
38
17
15
1.90
6648--6710
18
3.5
18
76
8
65
25
46
15
12
1.82
6651--6762
36
3.1
36
77
2
100
22
43
19
14
1.87
6716--6766
18
2.8
18
81
0
66
23
41
23
11
1.87
8041--8195
15
10.3
15
69
15
79
30
27
25
16
1.96
8003--8188
60
3.1
60
92
1
293
32
26
25
16
1.96
8006--8180
30
5.8
30
69
1
127
32
27
24
16
1.96

Tables:   1

The End!