Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014780.1 Corchorus capsularis cultivar CVL-1 contig14801, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15215

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4773--4802
13
2.3
13
100
0
60
13
36
16
33
1.88
13279--13337
30
1.9
31
93
3
102
33
18
3
44
1.67
13279--13344
30
2.1
31
88
5
98
34
16
4
43
1.68
13437--13512
22
3.5
22
89
3
91
35
14
17
32
1.90
13501--13598
22
4.2
22
74
17
81
36
6
16
40
1.73
13671--13738
19
3.5
20
82
10
70
44
11
19
25
1.84
13682--13735
19
2.8
19
94
0
90
42
11
24
22
1.85
13726--14281
22
25.7
22
68
14
178
39
9
14
37
1.78
13917--14018
23
4.5
23
80
3
82
39
6
13
40
1.72
14070--14155
45
1.9
45
82
0
109
33
11
17
37
1.86
14447--14603
74
2.1
74
91
2
253
22
29
8
40
1.83

Tables:   1

The End!