Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014784.1 Corchorus capsularis cultivar CVL-1 contig14805, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14140

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
463--512
25
2.0
26
84
4
66
36
26
22
16
1.94
4379--4469
25
3.6
25
95
0
155
21
23
26
28
1.99
5651--5719
31
2.2
32
89
7
106
27
17
5
49
1.69
5802--5873
38
2.0
36
83
8
92
16
15
12
55
1.69
6015--6051
18
2.0
19
85
15
51
29
2
2
64
1.21
6219--6359
22
6.3
22
72
8
88
34
10
17
36
1.85
6471--6777
22
13.8
21
68
19
101
40
9
14
34
1.80
6654--6801
44
3.3
43
74
12
113
45
8
12
33
1.72
6636--6801
88
1.9
87
81
9
203
44
9
12
33
1.74
6883--6933
19
2.6
20
87
6
77
47
11
15
25
1.80
6883--7369
22
22.5
22
72
7
259
38
10
16
35
1.82
7371--7417
21
2.2
21
85
7
60
51
4
12
31
1.59
7863--7933
16
4.4
16
75
7
72
9
16
33
39
1.82
8174--8255
42
2.0
42
92
0
137
36
3
19
40
1.69
8375--8418
22
2.0
22
100
0
88
36
22
4
36
1.75
8378--8425
22
2.2
22
88
0
69
43
20
4
31
1.71
8821--8857
16
2.3
16
90
0
56
13
24
35
27
1.93
8805--8901
48
2.0
48
80
11
110
14
22
31
30
1.94
8814--8921
16
6.9
16
74
13
55
12
22
34
30
1.92
8832--8931
32
3.1
32
84
2
112
11
22
35
32
1.89
8816--8923
48
2.3
47
80
12
114
12
22
35
30
1.90
9989--10022
3
11.0
3
93
6
59
67
0
0
32
0.91

Tables:   1

The End!