Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014785.1 Corchorus capsularis cultivar CVL-1 contig14806, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18677

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32--65
2
17.0
2
100
0
68
50
0
0
50
1.00
243--529
106
2.7
109
80
10
338
52
5
12
28
1.63
1460--1518
25
2.5
24
86
5
75
37
20
0
42
1.52
1528--1595
26
2.6
26
85
0
100
55
8
1
33
1.40
3283--3333
17
2.9
18
74
11
61
45
5
3
45
1.46
5808--5861
27
2.0
27
92
0
90
51
1
14
31
1.53

Tables:   1

The End!