Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014786.1 Corchorus capsularis cultivar CVL-1 contig14807, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14849

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1573--1653
31
2.6
32
88
2
110
38
12
11
38
1.79
2664--2700
2
18.5
2
88
0
56
51
0
0
48
1.00
4709--4749
17
2.4
18
84
12
59
26
2
14
56
1.51
10050--10093
21
2.1
21
86
0
61
18
34
9
38
1.82
10407--10499
32
2.9
32
88
0
123
15
36
36
11
1.84
11157--11201
23
1.9
23
86
4
63
26
8
6
57
1.54
11816--11854
16
2.4
16
95
0
69
33
0
2
64
1.08
11817--11863
16
2.9
16
84
9
53
40
2
2
55
1.24
13709--13743
2
17.5
2
93
0
61
48
0
2
48
1.16
14759--14796
17
2.2
17
95
0
67
31
2
15
50
1.58

Tables:   1

The End!