Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014790.1 Corchorus capsularis cultivar CVL-1 contig14811, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27973

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41--123
41
2.0
41
95
0
148
31
13
6
49
1.66
215--263
22
2.3
22
82
10
57
14
51
0
34
1.43
7617--7686
22
2.8
25
72
27
69
60
0
0
40
0.97
9058--9603
272
2.0
266
82
8
665
38
9
13
38
1.78
11461--11517
25
2.3
25
96
0
105
19
5
17
57
1.58
13085--13133
25
2.0
25
95
0
89
34
0
36
28
1.58
13540--13608
30
2.3
29
87
5
93
30
18
15
34
1.93
13610--13688
32
2.5
31
80
11
81
31
25
11
31
1.91
25269--25321
21
2.5
20
84
3
61
9
32
32
26
1.88

Tables:   1

The End!