Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014796.1 Corchorus capsularis cultivar CVL-1 contig14817, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13432

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2670--2716
24
2.0
24
83
8
60
14
8
4
72
1.24
4534--4623
16
5.8
16
85
8
123
7
14
37
40
1.75
4581--4666
6
13.5
6
74
20
68
3
18
44
33
1.67
4612--4666
23
2.4
23
90
6
85
1
21
47
29
1.61
4614--4664
17
2.9
18
88
5
70
1
21
50
25
1.59
5412--5447
6
6.2
6
93
6
56
0
19
50
30
1.48
5412--5446
11
3.1
11
88
8
52
0
20
51
28
1.47
5438--5479
16
2.6
16
84
0
57
9
14
38
38
1.78
6620--6653
16
2.2
16
89
5
52
29
2
8
58
1.43
13380--13413
12
2.7
13
90
4
52
20
11
8
58
1.59

Tables:   1

The End!