Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014816.1 Corchorus capsularis cultivar CVL-1 contig14837, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29801

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3369--3431
30
2.1
30
94
5
110
28
17
34
19
1.94
5773--5822
23
2.2
23
81
0
55
28
22
20
30
1.98
5812--5854
22
2.0
22
95
0
77
23
30
18
27
1.98
10220--10282
30
2.1
30
88
5
92
20
33
15
30
1.94
10616--10705
33
2.7
33
81
6
103
36
23
10
30
1.87
10721--10816
33
2.9
33
82
0
93
43
17
10
28
1.82
18633--18665
14
2.4
14
94
0
57
30
9
51
9
1.64
21366--21459
30
3.1
29
84
6
116
11
24
40
23
1.88

Tables:   1

The End!