Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014817.1 Corchorus capsularis cultivar CVL-1 contig14838, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41565

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2168--2241
21
3.5
21
88
1
94
21
6
18
52
1.68
9483--9572
35
2.6
34
86
5
128
24
11
7
56
1.60
21289--21338
21
2.3
22
93
3
84
12
22
46
20
1.83
29496--29572
21
3.6
21
85
1
91
12
15
48
23
1.80
30785--30843
30
2.0
30
86
6
84
25
28
15
30
1.96
31222--31297
33
2.3
33
86
0
98
43
19
11
25
1.85
35210--35234
10
2.5
10
100
0
50
24
8
20
48
1.76
39959--39997
20
2.0
20
85
5
53
28
10
5
56
1.54
41120--41159
12
3.3
12
96
0
71
7
32
27
32
1.85
41096--41183
30
3.1
30
69
24
82
7
31
31
28
1.86

Tables:   1

The End!