Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014822.1 Corchorus capsularis cultivar CVL-1 contig14843, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14736

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1110--1151
19
2.2
20
82
4
50
54
26
9
9
1.63
4889--5707
431
1.9
435
84
5
1109
31
15
11
41
1.83
6554--6938
198
1.9
200
86
1
549
34
18
14
32
1.91
7415--7442
14
2.0
14
100
0
56
21
14
14
50
1.78
7589--7627
20
2.0
20
94
0
69
30
10
17
41
1.83
9098--9131
17
2.0
17
88
0
50
11
35
2
50
1.54
9846--9924
41
2.0
41
89
2
124
39
6
10
44
1.64
9958--10057
30
3.3
30
78
8
112
39
3
17
41
1.64
9997--10113
51
2.3
52
91
4
184
41
1
17
39
1.60
11066--11300
49
4.8
49
81
3
267
18
29
16
35
1.93
11066--11291
99
2.3
98
88
2
328
18
30
16
34
1.93
11726--13060
395
3.4
393
83
5
1737
34
18
12
33
1.89
11726--13060
199
6.7
198
83
5
1621
34
18
12
33
1.89
14402--14432
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!