Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014830.1 Corchorus capsularis cultivar CVL-1 contig14851, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33722

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1246--1301
16
3.2
16
85
12
67
76
0
12
10
1.01
1280--1305
6
4.3
6
100
0
52
69
0
15
15
1.20
5662--5718
20
2.7
19
73
23
51
66
0
0
33
0.92
5734--5765
13
2.4
14
89
10
57
78
0
0
21
0.76
18718--18779
31
2.0
31
90
0
97
45
20
12
20
1.84
18846--18947
29
3.4
29
72
10
89
25
18
20
35
1.95
18823--18970
60
2.5
60
87
0
206
25
18
20
35
1.95
18830--18922
31
3.1
31
72
12
111
22
19
22
35
1.96
19506--19552
2
23.5
2
82
0
58
48
2
2
46
1.25
25059--25097
21
1.9
20
94
5
69
30
15
10
43
1.80

Tables:   1

The End!