Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014846.1 Corchorus capsularis cultivar CVL-1 contig14867, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9085

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
325--369
16
2.8
16
86
0
63
4
15
42
37
1.67
416--449
17
2.0
17
88
11
52
5
17
47
29
1.71
1945--2022
38
2.1
38
100
0
156
47
19
10
23
1.79
4872--4922
2
26.5
2
86
7
70
1
47
1
49
1.24
5744--5792
2
25.0
2
91
4
82
0
48
0
51
1.00
6466--6531
33
2.1
31
88
11
98
24
13
13
48
1.79
7320--7347
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!