Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014848.1 Corchorus capsularis cultivar CVL-1 contig14869, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7046

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33--622
294
2.0
295
94
1
1049
34
11
3
50
1.57
2709--2765
19
2.9
19
75
10
60
38
8
17
35
1.81
2701--2764
21
3.1
21
73
8
69
37
7
18
35
1.80
4644--4687
23
1.9
24
86
9
65
45
13
0
40
1.44
6326--6363
11
3.5
11
85
10
51
57
2
0
39
1.12
6678--6761
41
2.0
42
97
2
161
46
7
4
41
1.52

Tables:   1

The End!