Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014854.1 Corchorus capsularis cultivar CVL-1 contig14875, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29364

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2108--2149
20
2.1
20
95
0
75
35
16
19
28
1.93
11529--11678
76
2.0
77
94
1
266
30
24
7
38
1.82
12377--12402
9
2.9
9
100
0
52
92
0
0
7
0.39
14109--14190
40
2.0
40
100
0
164
25
21
20
31
1.98
21563--21618
27
2.1
27
100
0
112
10
26
14
48
1.76
22528--22640
58
1.9
58
98
0
217
23
14
26
36
1.93
27618--27649
14
2.2
15
94
5
57
53
31
15
0
1.43
28309--28335
2
13.5
2
100
0
54
51
0
0
48
1.00
29315--29364
2
25.0
2
100
0
100
50
0
0
50
1.00

Tables:   1

The End!