Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014855.1 Corchorus capsularis cultivar CVL-1 contig14876, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42843

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20324--20410
42
2.0
44
86
6
124
43
14
14
26
1.85
22400--22444
18
2.5
18
85
0
63
26
31
8
33
1.87
22690--22747
21
3.0
20
67
18
50
37
20
17
24
1.93
22690--22765
39
1.9
39
89
0
116
38
22
15
23
1.93
24350--24378
10
2.9
10
100
0
58
48
0
51
0
1.00
32879--32904
6
4.3
6
100
0
52
34
15
0
50
1.45
33049--33109
24
2.3
26
78
16
72
36
31
0
32
1.58
34815--34852
18
2.1
18
95
0
67
21
15
18
44
1.86
35476--35651
85
2.1
85
94
0
307
30
25
17
27
1.97
38054--38093
21
1.9
21
84
0
53
30
30
12
27
1.93

Tables:   1

The End!