Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014861.1 Corchorus capsularis cultivar CVL-1 contig14882, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6594

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1351--1380
3
9.7
3
92
7
51
0
33
0
66
0.92
4693--4757
32
2.0
32
96
0
121
35
9
27
27
1.87
5367--5501
21
6.4
21
74
15
100
54
0
44
0
1.05
5383--5510
6
23.3
6
67
21
68
53
0
45
0
1.05
5367--5477
21
5.0
23
84
11
126
53
0
46
0
1.00
5392--5510
15
7.7
16
68
20
58
54
0
44
0
1.05
5367--5477
42
2.5
45
82
11
140
53
0
46
0
1.00
5449--5529
27
3.0
27
87
3
101
55
3
40
0
1.17
5890--5927
2
19.0
2
100
0
76
50
0
0
50
1.00
6227--6331
36
3.1
36
61
18
87
49
18
5
26
1.69
6529--6594
2
33.0
2
100
0
132
50
0
50
0
1.00

Tables:   1

The End!