Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014874.1 Corchorus capsularis cultivar CVL-1 contig14895, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25169

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
318--342
2
12.5
2
100
0
50
52
0
0
48
1.00
2008--2042
10
3.3
10
85
14
52
5
0
8
85
0.73
3144--3182
2
19.0
2
84
5
51
46
2
5
46
1.38
6296--6341
22
2.1
21
84
11
58
28
13
4
54
1.57
6473--6533
22
2.7
22
73
9
61
39
11
13
36
1.80
6544--6623
23
3.5
23
84
1
99
38
13
6
41
1.70
6498--6623
45
2.8
45
79
10
125
37
14
8
39
1.77
6500--6863
22
16.8
22
70
12
182
35
16
8
39
1.79
6876--7112
22
10.7
22
71
11
121
34
11
10
43
1.76
6919--7066
66
2.3
67
82
8
180
35
11
9
43
1.73
6964--7181
22
9.7
22
67
19
96
34
11
10
43
1.75
7170--7271
22
4.6
21
71
11
62
42
18
4
34
1.72
7334--7464
22
5.9
21
75
8
91
38
18
9
33
1.82
7741--7800
25
2.4
25
77
11
68
48
1
5
45
1.34
9736--9770
11
3.2
11
83
0
52
77
17
5
0
0.96
9900--9937
2
18.5
2
89
5
58
47
0
5
47
1.24
11187--11221
17
2.1
17
100
0
70
34
5
11
48
1.63
24354--24403
15
3.6
15
69
20
54
62
2
0
36
1.07
24408--24432
12
2.1
12
100
0
50
52
0
0
48
1.00
24961--24991
2
16.0
2
93
6
55
51
0
0
48
1.00

Tables:   1

The End!