Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014876.1 Corchorus capsularis cultivar CVL-1 contig14897, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46337

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
251--454
22
9.2
22
77
10
139
34
11
17
37
1.85
251--402
44
3.5
44
85
4
182
36
11
15
36
1.84
249--419
66
2.6
66
81
5
200
36
11
15
36
1.83
496--550
22
2.5
22
80
11
67
40
10
18
30
1.85
566--627
22
2.8
22
80
9
65
37
9
17
35
1.83
644--873
22
10.5
22
69
9
78
42
10
13
34
1.78
706--895
44
4.3
44
74
5
163
43
9
12
34
1.75
980--1049
19
3.5
19
80
9
77
45
10
15
28
1.78
980--1557
22
26.6
22
69
14
179
39
10
15
35
1.81
17286--17366
40
2.0
40
97
0
153
27
22
8
41
1.82
23714--23752
1
39.0
1
100
0
78
100
0
0
0
0.00
26956--26992
2
18.5
2
94
0
65
51
0
0
48
1.00

Tables:   1

The End!