Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014878.1 Corchorus capsularis cultivar CVL-1 contig14899, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11664

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35--145
11
12.3
9
70
25
67
32
2
9
54
1.47
85--152
26
2.6
26
84
9
93
32
1
10
55
1.42
162--220
25
2.4
25
91
5
95
40
0
23
35
1.55
291--334
21
2.1
21
91
0
70
31
9
40
18
1.81
531--571
21
2.0
21
85
0
55
43
21
0
34
1.53
5546--5586
17
2.4
17
88
8
57
21
19
21
36
1.95
8657--8804
74
2.0
74
91
0
242
32
20
14
32
1.93

Tables:   1

The End!