Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014880.1 Corchorus capsularis cultivar CVL-1 contig14901, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12475

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
730--766
8
4.6
8
93
0
56
83
0
16
0
0.64
732--766
12
2.9
12
91
0
61
82
0
17
0
0.66
732--762
4
7.8
4
92
0
53
80
0
19
0
0.71
3682--4373
347
2.0
345
98
0
1348
35
17
11
35
1.87
4954--5356
104
4.0
105
72
12
279
35
12
8
42
1.73
5448--5668
119
1.9
119
81
6
261
43
7
12
37
1.70
6292--6347
26
2.2
26
93
3
96
46
7
5
41
1.54
8209--8233
13
1.9
13
100
0
50
28
0
0
72
0.86
8834--8874
15
2.9
15
82
13
52
46
0
4
48
1.23
9623--9661
20
2.0
20
85
10
53
38
0
0
61
0.96

Tables:   1

The End!