Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014882.1 Corchorus capsularis cultivar CVL-1 contig14903, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18569

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
123--147
2
12.5
2
100
0
50
48
0
0
52
1.00
1757--1794
11
3.5
11
85
10
51
57
2
0
39
1.12
3659--3691
18
1.9
17
88
11
50
18
15
3
63
1.43
3926--4115
100
1.9
100
81
7
233
34
8
5
51
1.56
5117--5291
87
2.0
88
98
1
343
41
10
14
33
1.80
5350--11050
331
17.3
329
77
8
4908
32
14
16
36
1.89
12672--12780
34
3.0
36
88
6
150
31
13
11
44
1.79
12818--12878
24
2.3
26
78
16
72
32
0
29
37
1.58
13015--13046
10
3.1
10
95
4
55
50
0
9
40
1.35
16479--16552
37
2.0
37
94
0
130
32
27
2
37
1.71
17974--18254
139
2.0
139
99
0
553
47
23
5
22
1.72
18368--18412
9
5.0
9
83
0
54
46
4
15
33
1.66
18374--18412
18
2.2
18
95
0
69
46
2
15
35
1.60

Tables:   1

The End!