Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014883.1 Corchorus capsularis cultivar CVL-1 contig14904, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75416

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
343--369
2
13.5
2
100
0
54
51
0
0
48
1.00
3132--3188
28
2.0
28
100
0
114
28
21
10
40
1.86
3331--3360
2
15.0
2
92
0
51
46
3
0
50
1.18
5515--7310
896
2.0
897
95
0
3227
39
9
22
28
1.85
7296--7332
2
18.0
2
94
5
65
48
0
2
48
1.15
35495--35614
60
2.0
58
87
6
170
27
18
6
47
1.73
38425--38522
51
1.9
50
91
2
160
29
19
5
45
1.71
39303--39360
22
2.6
22
83
8
73
58
12
3
25
1.49
68115--68256
71
2.0
72
94
1
250
22
14
7
56
1.62
70459--70504
20
2.2
21
88
3
67
26
6
15
52
1.67

Tables:   1

The End!