Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014889.1 Corchorus capsularis cultivar CVL-1 contig14910, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25564

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--34
2
16.5
2
100
0
66
48
0
0
51
1.00
24--937
329
2.8
327
84
5
1136
31
15
16
36
1.89
9615--9647
16
2.1
16
100
0
66
69
12
0
18
1.18
16579--16650
29
2.4
30
84
9
85
43
15
16
25
1.87
18351--18389
18
2.3
17
91
8
62
69
0
10
20
1.17
20060--20088
6
4.8
6
100
0
58
0
13
0
86
0.58
20986--21024
3
13.0
3
100
0
78
33
0
0
66
0.92
24471--24522
24
2.2
24
93
3
88
55
0
36
7
1.29

Tables:   1

The End!