Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014894.1 Corchorus capsularis cultivar CVL-1 contig14915, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21544

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--43
2
20.0
2
100
0
80
50
0
0
50
1.00
1866--2046
89
2.0
89
100
0
362
40
13
16
29
1.86
6960--7099
70
2.0
70
98
0
271
47
20
7
24
1.76
7029--7240
116
1.9
109
88
6
316
43
16
10
28
1.81
8371--8423
8
7.0
8
86
4
67
13
56
13
16
1.67
9454--9504
27
2.0
25
88
11
77
41
3
15
39
1.66
12679--12712
11
3.0
11
91
4
50
0
14
0
85
0.60
20831--20856
12
2.2
12
100
0
52
23
34
0
42
1.54
21192--21238
18
2.7
18
78
21
55
27
29
0
42
1.56
21437--21482
16
2.7
17
86
6
58
67
2
15
15
1.33

Tables:   1

The End!