Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014899.1 Corchorus capsularis cultivar CVL-1 contig14920, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62839

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2110--2168
25
2.4
25
91
5
93
54
13
11
20
1.70
2811--2844
6
5.5
6
89
3
50
11
20
0
67
1.21
3117--3155
18
2.1
18
85
4
51
71
12
2
12
1.24
6041--6084
22
2.0
22
90
0
70
27
15
15
40
1.88
7634--7692
30
1.9
31
86
3
84
35
23
11
28
1.91
13767--13798
2
16.0
2
100
0
64
50
0
0
50
1.00
23129--23164
2
18.0
2
100
0
72
50
0
0
50
1.00
46075--46157
33
2.5
33
74
3
87
18
46
12
22
1.81
46170--46270
30
3.4
30
90
0
166
20
51
9
17
1.74
46086--46237
81
1.8
82
85
4
216
21
48
9
20
1.78
46337--46394
27
2.1
27
93
0
98
34
32
17
15
1.91
60464--60502
18
2.2
18
86
9
53
79
0
20
0
0.73
60460--60506
22
2.2
21
85
11
60
78
0
21
0
0.75
60460--60507
16
3.1
15
82
14
53
77
0
22
0
0.78
62670--62777
30
3.6
30
78
6
94
17
27
16
37
1.92

Tables:   1

The End!