Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014901.1 Corchorus capsularis cultivar CVL-1 contig14922, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34087

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1058--1129
37
1.9
37
94
0
126
19
34
25
20
1.96
2928--2996
33
2.1
34
97
2
131
40
20
8
30
1.82
3025--3072
25
1.9
25
86
0
69
47
14
10
27
1.76
15261--15288
2
14.0
2
100
0
56
50
0
0
50
1.00
17136--17214
30
2.7
29
78
7
79
30
20
12
36
1.90
21258--21303
23
2.0
24
91
4
76
73
0
19
6
1.04
22220--22249
10
2.8
11
90
10
53
60
0
20
20
1.37
23019--23083
27
2.7
22
70
20
67
47
6
18
27
1.72
25828--25853
2
13.0
2
100
0
52
50
0
0
50
1.00
29932--29980
15
3.3
14
75
13
53
46
6
4
42
1.47
32669--32699
2
15.5
2
100
0
62
48
0
0
51
1.00
32961--33002
20
2.0
21
90
4
68
23
21
21
33
1.97
33034--33058
2
12.5
2
100
0
50
48
0
0
52
1.00
33493--33561
29
2.4
28
83
7
93
18
18
17
44
1.86
33493--33569
29
2.6
28
83
4
91
18
22
15
44
1.87

Tables:   1

The End!