Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014904.1 Corchorus capsularis cultivar CVL-1 contig14925, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31448

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1043--1158
38
3.2
37
68
16
107
67
0
21
11
1.22
1136--1175
14
2.8
14
92
3
62
77
0
20
2
0.88
8565--8589
7
3.6
7
100
0
50
64
12
0
24
1.27
11597--11655
22
2.7
22
81
0
64
37
5
6
50
1.51
13514--13570
29
2.0
29
86
3
80
28
17
12
42
1.85
13714--13807
33
3.0
32
88
8
133
41
10
14
32
1.81
13714--13807
31
3.0
32
88
8
133
41
10
14
32
1.81
13852--13880
7
4.3
7
91
8
51
0
13
0
86
0.58
13852--13876
13
1.9
13
100
0
50
0
12
0
88
0.53
13971--14211
126
1.9
127
84
4
326
49
0
11
37
1.45
15417--15462
11
4.2
12
73
21
55
43
0
0
56
0.99
15407--15525
39
3.0
38
72
15
100
46
1
1
50
1.21
15416--15482
32
2.1
31
89
8
100
41
0
0
58
0.98
15417--15461
23
2.0
23
86
8
65
42
0
0
57
0.98
16008--16049
22
1.9
22
90
0
66
35
26
23
14
1.93
17805--17915
31
2.9
43
70
30
138
35
9
18
37
1.82
18167--18300
66
2.0
66
92
0
223
35
17
17
29
1.93
24807--24851
22
2.0
22
95
0
81
22
37
22
17
1.94
27393--27451
31
1.9
31
92
0
100
37
10
22
30
1.87
29355--29379
11
2.3
11
100
0
50
60
8
0
32
1.26

Tables:   1

The End!