Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014908.1 Corchorus capsularis cultivar CVL-1 contig14929, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24555

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
538--576
20
1.9
20
89
5
60
58
7
2
30
1.39
583--739
74
2.1
74
92
2
262
39
9
29
21
1.85
16969--17043
29
2.6
29
95
0
141
20
14
16
49
1.80
18339--18432
49
1.9
49
86
0
134
29
14
9
45
1.77
18543--18628
20
4.0
21
68
11
57
50
9
12
27
1.71
20083--20130
23
2.0
25
84
11
66
50
2
2
45
1.25
21971--22001
3
10.3
3
100
0
62
35
0
0
64
0.94
23878--24046
84
2.0
84
82
3
207
28
11
25
34
1.91
23968--24553
201
3.0
194
85
5
762
33
12
18
34
1.89

Tables:   1

The End!