Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014909.1 Corchorus capsularis cultivar CVL-1 contig14930, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4548

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--2095
399
5.3
389
78
14
1793
33
12
18
35
1.89
835--874
19
2.0
20
85
4
55
52
0
2
45
1.14
961--1489
173
3.0
173
85
6
638
32
13
19
35
1.90
1207--1733
180
3.0
177
80
9
488
35
12
16
35
1.87
1713--1759
23
2.0
23
100
0
94
29
21
27
21
1.98
3363--3449
41
2.1
42
86
2
122
41
21
8
28
1.82
4477--4515
20
1.9
20
89
5
60
58
7
2
30
1.39

Tables:   1

The End!