Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014910.1 Corchorus capsularis cultivar CVL-1 contig14931, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11734

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2294--2876
201
2.9
201
94
0
990
33
13
18
34
1.89
2702--3221
172
3.0
172
96
0
934
30
14
21
34
1.93
3098--3632
198
2.7
198
83
4
683
32
12
17
36
1.88
5224--5256
11
2.9
12
86
13
52
0
15
42
42
1.46
5277--5317
7
6.1
7
83
8
50
48
2
0
48
1.14
5281--5398
20
6.2
20
70
19
74
45
5
0
47
1.33
5339--5373
18
1.9
18
100
0
70
34
8
0
57
1.29
5343--5383
18
2.3
18
87
8
57
39
7
0
53
1.29
6987--7041
27
2.0
27
96
0
101
23
14
20
41
1.89
9350--9410
2
30.5
2
100
0
122
50
49
0
0
1.00

Tables:   1

The End!