Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014922.1 Corchorus capsularis cultivar CVL-1 contig14943, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10931

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
323--372
25
2.0
25
84
7
66
44
26
10
20
1.82
2665--2694
1
30.0
1
100
0
60
100
0
0
0
0.00
3742--3800
31
1.9
31
100
0
118
47
3
6
42
1.46
4231--4287
15
3.7
16
83
6
64
5
14
45
35
1.67
4231--4298
15
4.7
15
79
13
63
4
13
47
35
1.63
5075--5107
16
2.0
17
94
5
59
0
18
54
27
1.44
5097--5135
16
2.4
17
91
8
64
7
12
38
41
1.72
9757--9849
26
3.5
26
79
7
87
48
8
10
32
1.68
9757--9844
28
3.3
27
79
7
81
48
7
11
31
1.68

Tables:   1

The End!