Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014923.1 Corchorus capsularis cultivar CVL-1 contig14944, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20848

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1397--1432
3
12.3
3
94
5
65
30
0
36
33
1.58
3748--3790
18
2.3
19
84
4
52
48
2
13
34
1.56
7021--7056
2
18.5
2
88
5
56
52
0
0
47
1.00
12817--13217
133
3.0
133
100
0
802
44
15
11
27
1.82
13418--13443
2
13.0
2
100
0
52
50
0
0
50
1.00
13648--13685
7
5.0
8
90
6
53
76
0
0
23
0.79
13654--13685
7
4.4
7
92
7
55
75
0
0
25
0.81
13654--13685
15
2.2
15
94
5
57
75
0
0
25
0.81
17376--17441
33
2.0
33
100
0
132
36
9
15
39
1.79
17959--18032
31
2.4
31
97
0
139
40
10
20
28
1.86
18063--18220
31
5.4
30
69
13
96
25
17
17
39
1.92
18063--18220
56
2.7
59
80
6
178
25
17
17
39
1.92
20285--20315
16
1.9
16
93
0
53
35
9
0
54
1.33

Tables:   1

The End!