Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014924.1 Corchorus capsularis cultivar CVL-1 contig14945, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10153

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1933--1960
14
2.0
14
100
0
56
42
14
7
35
1.73
5096--5126
16
1.9
16
93
0
53
35
9
0
54
1.33
5463--6317
199
4.3
200
86
4
1037
34
18
13
33
1.90
5463--6317
196
4.3
199
84
6
1008
34
18
13
33
1.90
7405--7451
21
2.2
21
84
0
58
29
8
4
57
1.48
7417--7477
22
2.9
21
78
4
68
34
6
9
49
1.62
7997--8050
27
2.0
27
85
0
72
33
14
9
42
1.78
9013--9042
15
2.0
15
93
0
51
63
6
0
30
1.20

Tables:   1

The End!