Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014930.1 Corchorus capsularis cultivar CVL-1 contig14951, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54784

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--56
17
3.1
16
86
8
66
39
21
17
21
1.93
7185--7215
2
15.5
2
100
0
62
51
0
0
48
1.00
9887--9940
26
2.1
26
85
0
72
50
7
5
37
1.54
11165--11221
28
2.0
28
96
0
105
45
3
26
24
1.69
16987--17037
21
2.3
23
74
16
63
58
3
3
33
1.35
16993--17037
21
2.2
21
88
4
65
57
4
4
33
1.38
19831--19871
6
7.3
6
78
15
52
48
0
17
34
1.47
21234--21262
9
3.2
9
100
0
58
0
20
0
79
0.74
21813--21877
31
2.1
31
91
0
103
43
20
13
23
1.87
25545--25588
22
2.0
22
86
0
61
31
29
18
20
1.96
26758--26859
51
2.0
51
98
0
195
35
24
13
26
1.93
28995--29021
13
2.1
13
100
0
54
44
40
7
7
1.60
33532--33561
8
3.6
8
95
4
51
0
13
0
86
0.57
41839--41872
2
16.5
2
93
6
59
47
0
2
50
1.16
42215--42247
4
8.2
4
93
0
57
78
0
21
0
0.75
51483--51523
5
8.0
5
83
5
55
0
21
0
78
0.76
51484--51531
15
3.2
16
82
11
57
0
25
0
75
0.81
51496--51532
10
3.7
10
92
0
56
0
27
0
72
0.84
52796--52850
16
3.4
16
80
10
58
34
38
10
16
1.84

Tables:   1

The End!