Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014931.1 Corchorus capsularis cultivar CVL-1 contig14952, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16394

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5744--5773
15
1.9
16
93
6
53
46
40
13
0
1.43
5826--5890
16
4.0
17
74
8
64
52
29
12
6
1.63
5848--5905
16
3.7
16
76
2
64
53
29
10
6
1.61
5832--5913
32
2.6
32
86
3
121
53
30
10
4
1.57
6082--6137
16
3.5
15
81
11
67
39
33
8
17
1.81
6060--6146
32
2.7
32
89
0
129
37
36
11
13
1.81
7546--7612
35
1.9
35
90
3
109
49
7
11
31
1.67
10048--10079
12
2.7
12
95
0
55
56
6
6
31
1.49

Tables:   1

The End!