Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014939.1 Corchorus capsularis cultivar CVL-1 contig14960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7519

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
87--131
23
2.0
23
91
4
74
55
20
0
24
1.43
2084--2544
36
12.9
36
72
7
305
37
29
14
18
1.90
2084--2568
107
4.5
107
85
2
580
37
29
14
18
1.90
2132--2541
215
1.9
214
85
2
572
37
30
13
19
1.90
4033--4087
22
2.5
23
88
8
80
0
23
1
74
0.91
4033--4088
19
2.8
20
84
13
71
0
25
1
73
0.93
4795--4849
26
2.2
25
83
3
65
43
12
7
36
1.71
4917--4980
34
1.9
32
81
12
76
6
25
0
68
1.12

Tables:   1

The End!