Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014950.1 Corchorus capsularis cultivar CVL-1 contig14971, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10964

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109--161
26
2.0
27
85
3
72
22
49
16
11
1.78
199--302
16
6.5
16
76
8
86
36
38
15
9
1.80
198--302
32
3.3
32
75
7
97
36
38
16
9
1.81
445--481
14
2.7
14
87
4
58
67
0
13
18
1.23
833--1027
16
12.5
16
80
4
166
34
35
18
10
1.86
835--1027
48
4.1
47
85
3
203
35
36
18
10
1.85
4765--4842
27
2.9
26
79
12
79
35
28
19
16
1.93
4969--5013
21
2.1
22
87
4
65
33
8
40
17
1.81
5196--5274
32
2.5
32
97
0
149
16
44
26
12
1.83
5947--5996
3
16.7
3
83
8
66
64
0
4
32
1.12
7179--7226
23
2.1
23
81
11
55
27
2
12
58
1.46

Tables:   1

The End!