Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014951.1 Corchorus capsularis cultivar CVL-1 contig14972, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23548

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1841--1870
13
2.3
13
94
0
51
76
0
16
6
0.99
9054--9101
21
2.3
22
79
13
57
8
27
4
60
1.44
11778--12866
543
2.0
544
96
0
2011
30
12
23
34
1.92
17837--19751
435
4.4
437
90
1
2875
41
17
13
27
1.87
17834--19746
875
2.2
871
89
2
2928
41
17
13
27
1.87
19947--19988
2
22.5
2
83
13
54
54
0
0
45
0.99
20558--20785
113
2.0
113
96
0
420
35
18
29
17
1.93

Tables:   1

The End!