Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014953.1 Corchorus capsularis cultivar CVL-1 contig14974, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13846

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
412--463
23
2.3
23
86
0
77
48
19
9
23
1.78
571--663
27
3.5
26
86
2
114
45
25
13
15
1.83
957--985
2
14.5
2
100
0
58
51
0
0
48
1.00
2427--2602
41
4.1
41
79
12
201
21
21
25
31
1.98
2466--2602
40
3.0
46
75
18
169
21
20
24
33
1.97
2428--2602
89
2.0
90
96
1
325
21
20
25
32
1.98
9107--9190
35
2.4
35
97
0
159
14
20
32
33
1.92
9571--9613
21
2.1
21
91
4
70
44
4
27
23
1.73
11681--11714
16
2.1
16
89
10
52
44
23
26
5
1.76
11901--12001
32
3.2
32
88
0
112
37
31
10
19
1.87
11997--12029
18
1.9
17
88
11
50
30
42
15
12
1.83
13149--13215
27
2.5
27
95
0
116
14
17
22
44
1.86

Tables:   1

The End!