Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014955.1 Corchorus capsularis cultivar CVL-1 contig14976, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15455

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
771--1094
76
4.3
76
89
3
465
49
6
17
26
1.71
773--1094
114
2.8
114
81
4
364
49
6
17
26
1.71
773--1132
38
9.4
38
78
9
322
49
6
17
26
1.71
1294--1331
20
1.9
20
88
0
58
60
0
21
18
1.36
1242--1345
50
2.1
50
83
7
131
59
0
19
20
1.43
1283--1359
22
3.6
21
79
10
77
58
1
20
19
1.47
1299--1431
71
1.9
71
81
12
166
56
3
21
19
1.55
1395--1435
14
2.9
14
88
3
64
56
4
17
21
1.60
1383--1529
36
3.9
37
77
12
156
52
6
18
22
1.69
1395--1465
15
4.3
15
72
27
56
54
5
16
22
1.63
1410--1454
22
2.1
21
88
12
65
57
4
17
20
1.56
1410--1537
21
6.3
20
73
14
86
53
6
19
21
1.67
14201--14267
27
2.5
27
95
0
116
14
17
22
44
1.86

Tables:   1

The End!