Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014964.1 Corchorus capsularis cultivar CVL-1 contig14985, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16936

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5980--6023
9
4.9
9
78
10
54
52
0
0
47
1.00
5975--6025
18
3.0
18
75
21
56
49
0
0
50
1.00
7674--7710
18
2.1
18
89
0
56
35
24
16
24
1.95
9563--9632
29
2.4
29
83
7
88
20
21
15
42
1.88
9795--9892
30
3.3
29
80
5
99
40
13
24
21
1.89
9795--9870
30
2.6
30
82
2
100
40
13
23
22
1.89
12338--12534
71
2.7
72
84
9
260
34
16
10
39
1.83
12334--12493
18
9.1
18
66
18
86
33
16
10
39
1.82
12334--12536
35
5.6
36
85
9
265
33
16
9
39
1.82

Tables:   1

The End!