Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01014967.1 Corchorus capsularis cultivar CVL-1 contig14988, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25960

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--846
48
17.6
48
82
5
976
12
26
23
37
1.91
1--846
287
2.9
286
88
1
1300
12
26
23
37
1.91
12548--12609
25
2.5
26
76
15
76
43
3
0
53
1.17
17830--17963
26
4.7
29
72
27
90
38
26
15
19
1.92
17828--18071
58
4.3
57
79
10
261
38
27
14
19
1.90
17970--18071
30
3.4
30
78
10
100
38
30
13
17
1.89

Tables:   1

The End!